Achievements
2016
Keiichi Inoue, Shota Itoh, Yoshitaka Kato, Yurika Nomura, Mikihiro Shibata, Takayuki Uchihashi, Satoshi Tsunoda and Hideki Kandori *, "Natural light-driven inward proton pump", Nat. Commun. 7, 13415 (2016). DOI: 10.1038 / ncomms13415.
Takayuki Uchihashi, Hiroki Watanabe, Shingo Fukuda, Mikihiro Shibata and Toshio. Ando "Functional extension of high-speed atomic force microscopy", Ultramicroscopy 160, 182-196 (2016). DOI: 10.1016 / j.ultramic. 2015.10.017.
2015
Wilaiwan Sriwimol, Aratee Aroonkesorn, Somsri Sakdee, Chalermpol Kanchanawarin, Takayuki Uchihashi, Toshio Ando and Chanan Angsuthanasombat *, "Potential pre-pore trimer formation by the Bacillus thuringiensis mosquito-specific toxin: Molecular insights into a critical prerequisite of membrane-bound , J. Biol. Chem. 290 (34), 20793-20803 (2015). DOI: 10.1074 / jbc.M114.627554.
Shingo Fukuda, Takayuki Uchihashi, Toshio Ando *, "Method of mechanical holding of cantilever chip for tip-scan high-speed atomic force microscopy", Rev. Sci. Instrum. 86, 063703 (2015). DOI: 10.1063 / 1.4922381.
Kouta Takeda, Takayuki Uchihashi, Hiroki Watanabe, Takuya Ishida, Kiyohiko Igarashi, Nobuhumi Nakamura *, Hiroyuki Ohno, "Real-time dynamic adsorption processes of cytochrome c on an electrode observed through electrochemical high-speed atomic force microscopy", PLoS One 10 ( 2), e0116685 (10 pages) (2015). DOI: 10.1371 / journal.pone.0116685.
Mikihiro Shibata, Takayuki Uchihashi, Toshio Ando and Ryohei Yasuda *, "Long-tip high-speed atomic force microscopy for nanometer-scale imaging in live cells", Sci. Rep. 5, 8724 (7 pp) (2015). DOI: 10.1038 / srep08724.
Motonori Imamura, Takayuki Uchihashi, Toshio Ando, Annika Leifert, Ulrich Simon, Ali D. Malay, and Jonathan G. Heddle *, "Probing structural dynamics of an artificial protein cage using high-speed atomic force microscopy", Nano Lett. 15 ( 2): 1331–1335 (2015). DOI: 10.1021 / nl5045617.
2014
Yusuke. Shibafuji, Akihiko Nakamura, Takayuki Uchihashi, Naohisa Sugimoto, Shingo Fukuda, Hiroki Watanabe, Masahiro Samejima, Toshio Ando, Hiroyuki Noji, Anu Koivula, Kiyohiko Igarashi, and Ryota Iino *, "Single-molecule imaging analysis of elementary reaction steps of" Trichoderma Reesei cellobiohydrolase I (Cel7A) hydrolyzing crystalline cellulose ", J. Biol. Chem. 289, 14056-14065 (2014). DOI: 10.1074 / jbc.M113.546085.
Toshio Ando *, Takayuki Uchihashi, and Simon Scheuring, "Filming biomolecular processes by high-speed atomic force microscopy", Chem. Rev. 114 (6), 3120-3188 (2014). DOI: 10.1021 / cr4003837.
Aikihiko Nakamura, Hiroki Watanabe, Takuya Ishida, Takayuki Uchihashi, Masahisa Wada, Toshio Ando, Kiyohiko Igarashi *, and Masahiro Samejima, "Trade-off between processivity and hydrolytic velocity of cellobiohydrolases at the surface of crystalline cellulose", J. Am. Chem . Soc. 136, 4584-4592 (2014). DOI: 10.1021 / ja4119994.
Kiyohiko Igarashi *, Takayuki Uchihashi, Taku Uchiyama, Hayuki Sugimoto, Masahisa Wada, Kazushi Suzuki, Shohei Sakuda, Toshio Ando, Takeshi Watanabe, and Masahiro Samejima, "Two-way traffic of glycoside hydrolase family 18 processive chitinases on crystalline chitin", Nat . Commun. 5, 3975 (2014). DOI: 10.1038 / ncomms4975.
2013
Neval Yilmaz, Taro Yamada, Peter Greimel, Takayuki Uchihashi, Toshio Ando, and Toshihide Kobayashi *, "Real-Time Visualization of Assembling of a Sphingomyelin-Specific Toxin", Biophys. J. 105, 1397-1405 (2013). DOI: 10.1016 / j.bpj.2013.07.052
Shingo Fukuda, Takayuki Uchihashi, Ryota Iino, Yasutaka Okazaki, Masato Yoshida, Kiyohiko Igarashi, and Toshio Ando *, "High-speed atomic force microscope combined with single-molecule fluorescence microscope", Rev. Sci. Instrum. 84, 073706 (2013) ). DOI: 10.1063 / 1.4813280.
Hiroki Watanabe, Takayuki Uchihashi, Toshihide Kobashi, Mikihiro Shibata, Jun Nishiyama, Ryohei Yasuda, and Toshio Ando *, "Wide-area scanner for high-speed atomic force microscopy", Rev. Sci. Instrum. 84, 053702 (2013). DOI: 10.1063 / 1.4803449.
Hayato Yamashita, Keiichi Inoue, Mikihiro Shibata, Takayuki Uchihashi, Jun Sasaki, Hdeki Kandori, and Toshio. Ando *, "Role of trimer-trimer interaction of bacteriorhodopsin studied by optical spectroscopy and high-speed atomic force microscopy", J. Struct. Biol. 184, 2-11 (2013). DOI: 10.1016 / j.jsb. 2013.02.011.
Toshio Ando *, Takayuki Uchihashi, and Noriyuki Kodera, "High-speed AFM and applications to biomolecular systems", Annu. Rev. Biophys. 42, 393-414 (2013). DOI: 10.1146 / annurev-biophys-083012-130324.
2012
Toshio Ando, Takayuki Uchihashi, and Noriyuki Kodera, "High-speed atomic force microscopy", Jpn. J. Appl. Phys. 51, 08KA02 (15 pp) (2012). DOI: 10.1143 / JJAP.51.08KA02.
Hayato Yamashita, Azuma Taoka, Takayuki Uchihashi, Tomoya Asano, Toshio Ando, and Yoshihiro. Fukumori, "Single molecule imaging on living bacterial cell surface by high-speed AFM", J. Mol. Biol. 422 (2), 300-309 (2012). DOI: 10.1016 / j.jmb.2012.05.018
Takayuki Uchihashi #, Noriyuki Kodera #, and Toshio. Ando, "Guide to video recording of structure dynamics and dynamic processes of proteins by high-speed atomic force microscopy", Nat. Protoc. 7 (6), 1193-1206 (2012) . DOI: 10.1038 / nprot.2012.047. (#equal contribution)
Kiyohiko Igarashi, Takayuki Uchihashi, Anu Koivula, Msahisa Wada, Satoshi Kimura, Merja Penttilä, Toshio Ando, and Masahiro Samejima, "Visualization of cellobiohydrolase I from Trichoderma reesei moving on crystalline cellulose using high-speed atomic force microscopy", Methods Enzymol. 510 , 169-182 (2012). DOI: 10.1016 / B978-0-12-415931-0.00009-4.
2011
Kiyohiko Igarashi #, Takayuki Uchihashi #, Anu Koivula, Msahisa Wada, Satoshi Kimura, Tetsuaki Okamoto, M.erja Penttilä, Toshio Ando, and Masahiro Samejima, "Traffic jams reduce hydrolytic efficiency of cellulase on cellulose surface", Science 333, 1279- 1282 (2011). DOI: 10.1126 / science.1208386. (#equal contribution)
Takayuki Uchihashi #, Ryota Iino #, Toshio Ando, and Hiroyuki Noji, "High-speed atomic force microscopy reveals rotary catalysis of rotorless F1-ATPase, Science 333, 755-758 (2011). DOI: 10.1126 / science.1205510. ( #equal contribution)
Mikihiro Shibata, Takayuki Uchihashi, Hayato Yamashita, Hideki Kandori, and Toshio Ando, "Structural changes in bacteriorhodopsin in response to alternate illumination observed by high-speed atomic force microscopy", Angew. Chem. Int. Ed. 50, 4410–4413 ( 2011). DOI: 10.1002 / anie.201007544.
Shigeto Inoue, Takayuki Uchihashi, Daisuke Yamamoto, and Toshio. Ando, "Direct observation of surfactant aggregate behavior on a mica surface using high-speed atomic force microscopy", Chem. Commun. 47, 4974–4976 (2011). DOI: 10.1039 /C0CC05762B.
2010
Daisuke Yamamoto, Takayuki Uchihashi, Noriyuki Kodera, Hayato Yamashita, Shingo Nishikori, Teru Ogura, Mikihiro Shibata, and Toshio Ando, "High-speed atomic force microscopy techniques for observing dynamic biomolecular processes", Methods Enzymol. 475 (Part B), 541 -564 (2010). DOI: 10.1016 / S0076-6879 (10) 75020-5.
Daisuke Yamamoto, Azuma Taoka, Takayuki Uchihashi, Hideaki Sasaki, Hiroki Watanabe, Toshio Ando, and Yoshihiro Fukumori, "Visualization and structural analysis of the bacterial magnetic organelle magnetosome using atomic force microscopy", Proc. Natl. Acad. Sci. USA 107, 9382-9387 (2010). DOI: 10.1073 / pnas.1001870107.
Mikihiro Shibata, Hayato Yamashita, Takayuki Uchihashi, Hideki. Kandori, and Toshio Ando, "High-speed atomic force microscopy shows dynamic molecular processes in photo-activated bacteriorhodopsin", Nat. Nanotechnol. 5, 208 --212 (2010). DOI: 10.1038 / nnano.2010.7.
2009
Hayato Yamashita, Kislon Voïtchovsky, Takayuki Uchihashi, Sonia Antoranz Contera, John F. Ryan, and Toshio Ando, "Dynamics of bacteriorhodopsin 2D crystal observed by high-speed atomic force microscopy", J. Struct. Biol. 167, 153-158 ( 2009).
DOI: 10.1016 / j.jsb.2009.04.011.
2008
Toshio Ando, Takayuki Uchihashi, and Takeshi. Fukuma, "High-speed atomic force microscopy for nano-visualization of dynamic biomolecular processes", Progr. Surf. Sci. 83, 337-437 (2008). DOI: 10.1016 / j.progsurf .2008.09.001.
Daisuke Yamamoto, Takayuki Uchihashi, Noriyuki Kodera, and Toshio Ando, "Anisotropic diffusion of point defects in two-dimensional crystal of streptavidin observed by high-speed atomic force microscopy", Nanotechnology 19, 384009 (9 pp) (2008). DOI: 10.1088 / 0957-4484/19/38/384009.
Atsushi Miyagi, Yasuo Tsunaka, Takayuki Uchihashi, Kouta Mayanagi, Susumu. Hirose, Kousuke Morikawa, and Toshio Ando, "Visualization of intrinsically disordered regions of proteins by high-speed atomic force microscopy", Chem. Phys. Chem. 9 (13) , 1859-1866 (2008). DOI: 10.1002 / cphc.200800210.
Takeshi Fukuma, Yasutaka Okazaki, Noriyuki Kodera, Takayuki Uchihashi, and Toshio Ando, "High resonance frequency force microscope scanner using inertia balance support", Appl. Phys. Lett. 92, 243119 (2008). DOI: 10.1063 / 1.2951594.
Toshio Ando, Takayuki Uchihashi, Noriyuki Kodera, Daisuke Yamamoto, Masaaki Taniguchi, Atsushi Miyagi, and Hayato Yamashita, "High-speed AFM and nano-visualization of biomolecular processes", Pflügers Archiv -Eur. J. Physiol. 456, 211-225 (2008). DOI: 10.1007 / s00424-007-0406-0.
2007
Toshio Ando, Takayuki Uchihashi, Noriyuki Kodera, Daisuke Yamamoto, Masaaki Taniguchi, Atsushi Miyagi, and Hayato Yamashita, "High-speed atomic force microscopy for observing dynamic biomolecular processes", J. Mol. Recognit. 20, 448-458 (2007) . DOI: 10.1002 / jmr.843.
Hayato Yamashita, Takayuki Uchihashi, Noriyuki Kodera, Atsushi Miyagi, Daisuke Yamamoto, Toshio Ando, "Tip-sample distance control using photo-thermal actuation of a small cantilever for high-speed atomic force microscopy", Rev. Sci. Instrum. 78, 083702 (5 pp) (2007). DOI: 10.1063 / 1.2766825.
2006
Takayuki Uchihashi, Hayato Yamashita, and Toshio Ando, "Fast phase imaging in liquids using a rapid scan atomic force microscope", Appl. Phys. Lett. 89, 213112 (3 pages) (2006). DOI: 10.1063 / 1.2387963.
Toshio Ando, Takayuki Uchihashi, Noriyuki Kodera, Atsushi Miyagi, Ryo Nakakita, Hayato Yamashita, and Mitsuru Sakashita, "High-speed atomic force microscopy for studying the dynamic behavior of protein molecules at work", Jpn. J. Appl. Phys. 45 (3B), 1897-1903 (2006). DOI: 10.1143 / JJAP.45.1897.
Takayuki Uchihashi, Noriyuki Kodera, Hisanori Itoh, Hayato Yamashita, and Toshio Ando, "Feed-forward control for high-speed AFM imaging of biomolecules", Jpn. J. Appl. Phys. 45 (3B), 1904-1908 (2006) . DOI: 10.1143 / JJAP.45.1904.
2005
Toshio Ando, Takayuki Uchihashi, Noriyuki Kodera, Atsushi Miyagi, Ryo Nakakita, Hayato Yamashita, and Keiko Matada, "High-speed AFM for studying the dynamic behavior of protein molecules at work", eJ. Surf. Sci. Nanotechnol. 3, 384 -392 (2005). DOI: 10.1380 / ejssnt. 2005.384.
Masashi Ishii, Aiko Nakao, and Takayuki Uchihashi, "Capacitance XAFS Method: A New Site-Selective and Microscopic X-Ray Absorption Spectroscopy", Physica Scripta. T115, 97–101 (2005). DOI: 10.1238 / Physica.Topical.115a00097 ..
Alan A. Farrell, Takeshi Fukuma, Takayuki Uchihashi, Euan R. Kay, Giovanni Bottari, David A. Leigh, Hirofumi Yamada, and Suzanne P. Jarvis, "Conservative and dissipative force imaging of switchable rotaxanes with frequency-modulation atomic force microscopy" , Phys. Rev. B. 72, 125430 (2005). DOI: 10.1103 / PhysRev B.72.125430.
John E Sader, Takayuki Uchihashi, Michael J. Higgins, Alan Farrell, Yoshikazu Nakayama, and Suzanne P. Jarvis, "Quantitative force measurements using frequency modulation atomic force microscopy—theoretical foundations", Nanotechnology 16, S94-101 (2005). DOI : 10.1088 / 0957-4484/16/3/018.
Michael J. Higgins, Christian K. Riener, Takayuki Uchihashi, John E. Sader, Rachel McKendry, and Suzanne P. Jarvis, "Frequency modulation atomic force microscopy: a dynamic measurement technique for biological systems", Nanotechnology 16, S85-89 ( 2005). DOI: 10.1088 / 0957-4484/16/3/016.
Takayuki Uchihashi, Micahel Higgins1, Yoshikazu Nakayama, John E. Sader, and Suzanne P Jarvis, "Quantitative measurement of solvation shells using frequency modulated atomic force microscopy", Nanotechnology 16, S49-53 (2005). DOI: 10.1088 / 0957-4484 / 16/3/009.
2004
Takayuki Uchihashi, Michael J. Higgins, Satoshi Yasuda, Suzanne P. Jarvis, Seiji Akita, Yoshikazu Nakayama, and John E. Sader, "Quantitative force measurements in liquid using frequency modulation atomic force microscopy", Appl. Phys. Lett. 85, 3575-3577 (2004). DOI: 10.1063 / 1.1803932.